How to preprocess Waters. raw MSe data using MZmine 2?
I am working with Waters Xevo GS-2 Q-TOF mass spectrometer in MSe mode to analyze and identify phenolic compounds (mainly flavonoids) in a water/metanol extract. But, when i open my .raw files, every peak is represented as MS1. Where my MS2 peaks go? It is a way to fix this issue??