pretreatment method function on A1260

I am trying to figure out how to do 2 needle washes between samples on an A1260 on empower. Have tried adding two wash functions to pretreatment method tab on instrument method (vials 99 and 100) and it does the washes ok but then the needle goes to the home position and does not proceed to the sample set. Is there some setting I need to use somewhere to get it to proceed to the sample set? Also, how do you set it up so it does this wash sequence all through the sample set? Thanks
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